STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBED3Zinc finger BED-type containing 3. (218 aa)    
Predicted Functional Partners:
NLRP5
NLR family pyrin domain containing 5.
    
 
 0.950
OOEP
Oocyte expressed protein.
    
 
 0.908
PADI6
Peptidyl arginine deiminase 6.
    
 
 0.873
PADI4
Peptidyl arginine deiminase 4.
    
 
 0.786
ENSNVIP00000007219
annotation not available
    
 
 0.649
NLRP14
NLR family pyrin domain containing 14.
    
 
 0.643
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
    
 
 0.641
PADI1
Peptidyl arginine deiminase 1.
    
 
 0.602
PADI3
Peptidyl arginine deiminase 3.
    
 
 0.602
ENSNVIP00000002393
annotation not available
    
   0.585
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.