Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAD4SMAD family member 4. (552 aa)    
Predicted Functional Partners:
SMAD1
SMAD family member 1.
   
0.999
ENSNVIP00000028687
annotation not available
   
0.998
SMAD2
SMAD family member 2.
   
0.997
SMAD3
SMAD family member 3.
   
0.996
SKI
SKI proto-oncogene.
    
 0.995
SKIL
SKI like proto-oncogene.
    
 0.995
TRIM33
Tripartite motif containing 33.
   
 0.992
SMAD5
SMAD family member 5.
   
0.991
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.986
SMAD7
SMAD family member 7.
    
0.985
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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