HTR1E protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

HTR1E

5-hydroxytryptamine receptor 1E. (365 aa)

Predicted Functional Partners:

GNG4

0.931

GNB2

0.910

GNG2

0.892

GNAO1

0.889

ENSNVIP00000016323

0.887

GNG13

0.887

EDN2

0.884

ENSNVIP00000005538

0.879

GNB4

0.879

GNG7

0.867

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDN2	HTR1E	ENSNVIP00000020485	ENSNVIP00000003498	Endothelin 2.	5-hydroxytryptamine receptor 1E.	0.884
ENSNVIP00000005538	GNAO1	ENSNVIP00000005538	ENSNVIP00000021277	annotation not available	G protein subunit alpha o1.	0.950
ENSNVIP00000005538	GNB2	ENSNVIP00000005538	ENSNVIP00000001625	annotation not available	G protein subunit beta 2.	0.635
ENSNVIP00000005538	GNG13	ENSNVIP00000005538	ENSNVIP00000020774	annotation not available	G protein subunit gamma 13.	0.930
ENSNVIP00000005538	GNG2	ENSNVIP00000005538	ENSNVIP00000002258	annotation not available	G protein subunit gamma 2.	0.947
ENSNVIP00000005538	GNG4	ENSNVIP00000005538	ENSNVIP00000008906	annotation not available	G protein subunit gamma 4.	0.913
ENSNVIP00000005538	GNG7	ENSNVIP00000005538	ENSNVIP00000006853	annotation not available	G protein subunit gamma 7.	0.934
ENSNVIP00000005538	HTR1E	ENSNVIP00000005538	ENSNVIP00000003498	annotation not available	5-hydroxytryptamine receptor 1E.	0.879
ENSNVIP00000016323	HTR1E	ENSNVIP00000016323	ENSNVIP00000003498	Neuropeptide Y.	5-hydroxytryptamine receptor 1E.	0.887
GNAO1	ENSNVIP00000005538	ENSNVIP00000021277	ENSNVIP00000005538	G protein subunit alpha o1.	annotation not available	0.950
GNAO1	GNB2	ENSNVIP00000021277	ENSNVIP00000001625	G protein subunit alpha o1.	G protein subunit beta 2.	0.983
GNAO1	GNB4	ENSNVIP00000021277	ENSNVIP00000023030	G protein subunit alpha o1.	G protein subunit beta 4.	0.966
GNAO1	GNG13	ENSNVIP00000021277	ENSNVIP00000020774	G protein subunit alpha o1.	G protein subunit gamma 13.	0.983
GNAO1	GNG2	ENSNVIP00000021277	ENSNVIP00000002258	G protein subunit alpha o1.	G protein subunit gamma 2.	0.981
GNAO1	GNG4	ENSNVIP00000021277	ENSNVIP00000008906	G protein subunit alpha o1.	G protein subunit gamma 4.	0.970
GNAO1	GNG7	ENSNVIP00000021277	ENSNVIP00000006853	G protein subunit alpha o1.	G protein subunit gamma 7.	0.969
GNAO1	HTR1E	ENSNVIP00000021277	ENSNVIP00000003498	G protein subunit alpha o1.	5-hydroxytryptamine receptor 1E.	0.889
GNB2	ENSNVIP00000005538	ENSNVIP00000001625	ENSNVIP00000005538	G protein subunit beta 2.	annotation not available	0.635
GNB2	GNAO1	ENSNVIP00000001625	ENSNVIP00000021277	G protein subunit beta 2.	G protein subunit alpha o1.	0.983
GNB2	GNB4	ENSNVIP00000001625	ENSNVIP00000023030	G protein subunit beta 2.	G protein subunit beta 4.	0.759