Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDC42EP1CDC42 effector protein 1. (356 aa)    
Predicted Functional Partners:
ENSNVIP00000003529
annotation not available
    
 0.890
CDC42
Cell division cycle 42.
    
 0.890
ENSNVIP00000030096
annotation not available
    
 0.890
RHOQ
Ras homolog family member Q.
    
 0.740
RHOJ
Ras homolog family member J.
    
 0.556
ENSNVIP00000024744
Ras homolog family member G.
    
 0.544
RAC2
Rac family small GTPase 2.
    
 0.499
CCIN
Calicin.
    
 
 0.489
SLC24A3
Solute carrier family 24 member 3.
      
 0.488
ENSNVIP00000008369
Ras homolog family member H.
    
 0.470
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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