STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAPGEFL1Rap guanine nucleotide exchange factor like 1. (662 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.924
OGFOD3
2-oxoglutarate and iron dependent oxygenase domain containing 3.
      
 0.631
ENSNVIP00000020611
annotation not available
      
 0.608
SERAC1
Serine active site containing 1.
      
 0.540
ENSNVIP00000027645
Family with sequence similarity 118 member A.
      
 0.540
RRAD
RRAD, Ras related glycolysis inhibitor and calcium channel regulator.
    
 0.510
RAPGEF5
Rap guanine nucleotide exchange factor 5.
    
 
 0.501
PLCE1
Phospholipase C epsilon 1.
   
  
 0.497
ATP8B2
ATPase phospholipid transporting 8B2.
      
 0.492
LAPTM4A
Lysosomal protein transmembrane 4 alpha.
      
 0.490
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.