STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISL1ISL LIM homeobox 1. (349 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.950
LHX4
LIM homeobox 4.
   
 0.929
LHX3
LIM homeobox 3.
   
 0.896
LDB2
LIM domain binding 2.
    
 0.864
NKX2-5
NK2 homeobox 5.
    
 0.773
TBX20
T-box transcription factor 20.
   
 0.750
LMO4
LIM domain only 4.
    
   0.700
GATA4
GATA binding protein 4.
    
 0.698
PAX6
Paired box 6.
   
 0.658
TBX1
T-box transcription factor 1.
    
 0.655
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.