Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CNIH1Cornichon family AMPA receptor auxiliary protein 1. (160 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.944
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.930
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.898
AREG
Amphiregulin.
     
 0.880
TGFA
Transforming growth factor alpha.
     
 0.862
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.843
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.832
TMED2
Transmembrane p24 trafficking protein 2.
   
 0.828
ENSNVIP00000011665
annotation not available
     
 0.807
SEC24D
SEC24 homolog D, COPII coat complex component.
     
 0.807
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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