ENSNVIP00000003576 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSNVIP00000003576

annotation not available (416 aa)

Predicted Functional Partners:

ENSNVIP00000009414

0.850

ENSNVIP00000020431

0.749

ENSNVIP00000016544

0.607

SVOPL

0.551

CCDC114

0.550

ENSNVIP00000010389

0.545

SLC25A35

0.544

SLC38A8

0.544

SLC9C2

0.543

RWDD4

0.541

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC114	ENSNVIP00000003576	ENSNVIP00000015024	ENSNVIP00000003576	Coiled-coil domain containing 114.	annotation not available	0.550
CCDC114	RWDD4	ENSNVIP00000015024	ENSNVIP00000005967	Coiled-coil domain containing 114.	RWD domain containing 4.	0.419
ENSNVIP00000003576	CCDC114	ENSNVIP00000003576	ENSNVIP00000015024	annotation not available	Coiled-coil domain containing 114.	0.550
ENSNVIP00000003576	ENSNVIP00000009414	ENSNVIP00000003576	ENSNVIP00000009414	annotation not available	annotation not available	0.850
ENSNVIP00000003576	ENSNVIP00000010389	ENSNVIP00000003576	ENSNVIP00000010389	annotation not available	annotation not available	0.545
ENSNVIP00000003576	ENSNVIP00000016544	ENSNVIP00000003576	ENSNVIP00000016544	annotation not available	annotation not available	0.607
ENSNVIP00000003576	ENSNVIP00000020431	ENSNVIP00000003576	ENSNVIP00000020431	annotation not available	annotation not available	0.749
ENSNVIP00000003576	RWDD4	ENSNVIP00000003576	ENSNVIP00000005967	annotation not available	RWD domain containing 4.	0.541
ENSNVIP00000003576	SLC25A35	ENSNVIP00000003576	ENSNVIP00000006556	annotation not available	Solute carrier family 25 member 35.	0.544
ENSNVIP00000003576	SLC38A8	ENSNVIP00000003576	ENSNVIP00000026653	annotation not available	Solute carrier family 38 member 8.	0.544
ENSNVIP00000003576	SLC9C2	ENSNVIP00000003576	ENSNVIP00000018783	annotation not available	Solute carrier family 9 member C2 (putative).	0.543
ENSNVIP00000003576	SVOPL	ENSNVIP00000003576	ENSNVIP00000028745	annotation not available	SVOP like.	0.551
ENSNVIP00000009414	ENSNVIP00000003576	ENSNVIP00000009414	ENSNVIP00000003576	annotation not available	annotation not available	0.850
ENSNVIP00000009414	ENSNVIP00000010389	ENSNVIP00000009414	ENSNVIP00000010389	annotation not available	annotation not available	0.480
ENSNVIP00000009414	ENSNVIP00000016544	ENSNVIP00000009414	ENSNVIP00000016544	annotation not available	annotation not available	0.401
ENSNVIP00000009414	ENSNVIP00000020431	ENSNVIP00000009414	ENSNVIP00000020431	annotation not available	annotation not available	0.409
ENSNVIP00000010389	ENSNVIP00000003576	ENSNVIP00000010389	ENSNVIP00000003576	annotation not available	annotation not available	0.545
ENSNVIP00000010389	ENSNVIP00000009414	ENSNVIP00000010389	ENSNVIP00000009414	annotation not available	annotation not available	0.480
ENSNVIP00000016544	ENSNVIP00000003576	ENSNVIP00000016544	ENSNVIP00000003576	annotation not available	annotation not available	0.607
ENSNVIP00000016544	ENSNVIP00000009414	ENSNVIP00000016544	ENSNVIP00000009414	annotation not available	annotation not available	0.401