Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDX2Caudal type homeobox 2. (314 aa)    
Predicted Functional Partners:
CDX1
Caudal type homeobox 1.
   
   0.746
OGG1
8-oxoguanine DNA glycosylase.
      
 0.628
FGF4
Fibroblast growth factor 4.
    
 
 0.619
WNT11
Wnt family member 11.
   
  
 0.613
FGF5
Fibroblast growth factor 5.
    
 
 0.592
ESRRB
Estrogen related receptor beta.
    
 
 0.562
TACSTD2
Tumor associated calcium signal transducer 2.
      
 0.560
KDSR
3-ketodihydrosphingosine reductase.
      
 0.551
TIMP2
TIMP metallopeptidase inhibitor 2.
      
 0.549
B3GLCT
Beta 3-glucosyltransferase.
      
 0.546
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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