Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX6Sorting nexin 6. (406 aa)    
Predicted Functional Partners:
SNX2
Sorting nexin 2.
   
0.967
SNX1
Sorting nexin 1.
   
0.964
SNX5
Sorting nexin 5.
  
0.954
SNX27
Sorting nexin 27.
    
 0.853
SNX8
Sorting nexin 8.
   
 0.839
VPS26B
VPS26, retromer complex component B.
   
 0.796
VPS26A
VPS26, retromer complex component A.
   
 0.775
VPS35
VPS35 retromer complex component.
   
 0.772
ENSNVIP00000001206
annotation not available
    
 0.768
SNX32
Sorting nexin 32.
     
  0.761
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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