Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEBPZCCAAT enhancer binding protein zeta. (1059 aa)    
Predicted Functional Partners:
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.996
PDCD11
Programmed cell death 11.
   
 
 0.990
RBM28
RNA binding motif protein 28.
   
 
 0.987
GTPBP4
GTP binding protein 4.
   
 
 0.987
DDX56
DEAD-box helicase 56.
   
 
 0.986
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.985
ENSNVIP00000021447
EBNA1 binding protein 2.
   
 
 0.984
ENSNVIP00000027998
annotation not available
   
 
 0.983
WDR74
WD repeat domain 74.
   
 
 0.982
NOP58
NOP58 ribonucleoprotein.
   
 
 0.981
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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