Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDCCAG8Serologically defined colon cancer antigen 8. (761 aa)    
Predicted Functional Partners:
KARS1
lysyl-tRNA synthetase 1.
    
 
 0.873
LARS1
leucyl-tRNA synthetase 1.
    
   0.858
IQCB1
IQ motif containing B1.
    
 0.744
ENSNVIP00000025664
annotation not available
    
 
 0.711
OFD1
OFD1 centriole and centriolar satellite protein.
    
 
 0.711
PLK1
Polo like kinase 1.
   
 0.707
MEA1
Male-enhanced antigen 1.
      
 0.663
PPIG
Peptidylprolyl isomerase G.
    
 
 0.655
TUBGCP2
Tubulin gamma complex associated protein 2.
    
 0.655
IARS1
isoleucyl-tRNA synthetase 1.
    
   0.645
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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