STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGRRF1Cell growth regulator with ring finger domain 1. (332 aa)    
Predicted Functional Partners:
CGREF1
Cell growth regulator with EF-hand domain 1.
      
 0.749
RNF170
Ring finger protein 170.
      
 0.744
RNF5
Ring finger protein 5.
      
 0.610
ANKLE2
Ankyrin repeat and LEM domain containing 2.
    
 
 0.605
RNF145
Ring finger protein 145.
    
 
 0.597
RNF130
Ring finger protein 130.
     
 0.585
FAM8A1
Family with sequence similarity 8 member A1.
      
 0.584
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
      
 0.558
DNAJB12
DnaJ heat shock protein family (Hsp40) member B12.
      
 0.535
RNF19B
Ring finger protein 19B.
    
 0.515
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.