ENSNVIP00000003680 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Experiments

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[Homology]

Score

ENSNVIP00000003680

annotation not available (93 aa)

Predicted Functional Partners:

WDR90

0.624

CCDC89

0.451

APBA2

0.440

WDR24

0.429

EPB41L3

0.423

APBA3

0.408

SCNN1A

0.405

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APBA2	ENSNVIP00000003680	ENSNVIP00000007700	ENSNVIP00000003680	Amyloid beta precursor protein binding family A member 2.	annotation not available	0.440
APBA3	ENSNVIP00000003680	ENSNVIP00000008728	ENSNVIP00000003680	Amyloid beta precursor protein binding family A member 3.	annotation not available	0.408
CCDC89	ENSNVIP00000003680	ENSNVIP00000003525	ENSNVIP00000003680	Coiled-coil domain containing 89.	annotation not available	0.451
CCDC89	EPB41L3	ENSNVIP00000003525	ENSNVIP00000014075	Coiled-coil domain containing 89.	Erythrocyte membrane protein band 4.1 like 3.	0.570
ENSNVIP00000003680	APBA2	ENSNVIP00000003680	ENSNVIP00000007700	annotation not available	Amyloid beta precursor protein binding family A member 2.	0.440
ENSNVIP00000003680	APBA3	ENSNVIP00000003680	ENSNVIP00000008728	annotation not available	Amyloid beta precursor protein binding family A member 3.	0.408
ENSNVIP00000003680	CCDC89	ENSNVIP00000003680	ENSNVIP00000003525	annotation not available	Coiled-coil domain containing 89.	0.451
ENSNVIP00000003680	EPB41L3	ENSNVIP00000003680	ENSNVIP00000014075	annotation not available	Erythrocyte membrane protein band 4.1 like 3.	0.423
ENSNVIP00000003680	SCNN1A	ENSNVIP00000003680	ENSNVIP00000032085	annotation not available	Sodium channel epithelial 1 alpha subunit.	0.405
ENSNVIP00000003680	WDR24	ENSNVIP00000003680	ENSNVIP00000020385	annotation not available	WD repeat domain 24.	0.429
ENSNVIP00000003680	WDR90	ENSNVIP00000003680	ENSNVIP00000019638	annotation not available	WD repeat domain 90.	0.624
EPB41L3	CCDC89	ENSNVIP00000014075	ENSNVIP00000003525	Erythrocyte membrane protein band 4.1 like 3.	Coiled-coil domain containing 89.	0.570
EPB41L3	ENSNVIP00000003680	ENSNVIP00000014075	ENSNVIP00000003680	Erythrocyte membrane protein band 4.1 like 3.	annotation not available	0.423
SCNN1A	ENSNVIP00000003680	ENSNVIP00000032085	ENSNVIP00000003680	Sodium channel epithelial 1 alpha subunit.	annotation not available	0.405
WDR24	ENSNVIP00000003680	ENSNVIP00000020385	ENSNVIP00000003680	WD repeat domain 24.	annotation not available	0.429
WDR24	WDR90	ENSNVIP00000020385	ENSNVIP00000019638	WD repeat domain 24.	WD repeat domain 90.	0.557
WDR90	ENSNVIP00000003680	ENSNVIP00000019638	ENSNVIP00000003680	WD repeat domain 90.	annotation not available	0.624
WDR90	WDR24	ENSNVIP00000019638	ENSNVIP00000020385	WD repeat domain 90.	WD repeat domain 24.	0.557