Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMBRD1LMBR1 domain containing 1. (544 aa)    
Predicted Functional Partners:
ABCD4
ATP binding cassette subfamily D member 4.
    
 0.994
ABCD3
ATP binding cassette subfamily D member 3.
    
 0.783
ENSNVIP00000010860
Metabolism of cobalamin associated A.
      
 0.754
MMADHC
Metabolism of cobalamin associated D.
      
 0.754
ENSNVIP00000024124
Metabolism of cobalamin associated B.
      
 0.753
SLC37A3
Solute carrier family 37 member 3.
      
 0.752
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase.
      
 0.742
ATRAID
All-trans retinoic acid induced differentiation factor.
      
 0.740
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
      
 0.739
ENSNVIP00000024606
Metabolism of cobalamin associated C.
      
 0.731
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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