STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKCSHProtein kinase C substrate 80K-H. (653 aa)    
Predicted Functional Partners:
GANAB
Glucosidase II alpha subunit.
   
 0.999
GNPTAB
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
 0.951
CALR
Calreticulin.
   
 0.904
ENSNVIP00000012465
annotation not available
   
 0.901
CANX
Calnexin.
   
 0.901
MYDGF
Myeloid derived growth factor.
   
   0.836
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.821
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.793
SEC63
SEC63 homolog, protein translocation regulator.
   
  
 0.756
CDH1
Cadherin 1.
   
 
  0.706
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.