Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSNVIP00000003732Vacuolar protein sorting 45 homolog. (570 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn, RAB effector.
    
 0.996
STX16-NPEPL1
STX16-NPEPL1 readthrough (NMD candidate).
    
 
 0.966
ENSNVIP00000009318
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.956
ENSNVIP00000021971
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.917
ENSNVIP00000025152
RAB5A, member RAS oncogene family.
    
 0.907
ENSNVIP00000026956
Component of oligomeric golgi complex 6.
    
 0.903
ERGIC3
ERGIC and golgi 3.
 
      0.899
COG4
Component of oligomeric golgi complex 4.
   
 
 0.888
YKT6
YKT6 v-SNARE homolog.
    
 
 0.883
VAMP4
Vesicle associated membrane protein 4.
    
 
 0.876
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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