STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf100Chromosome 1 open reading frame 100. (144 aa)    
Predicted Functional Partners:
CFAP45
Cilia and flagella associated protein 45.
    
 
 0.850
ODF3
Outer dense fiber of sperm tails 3.
   
   0.829
ENSNVIP00000001950
Chromosome 11 open reading frame 1.
    
   0.828
C7orf31
Chromosome 7 open reading frame 31.
    
   0.828
ENSNVIP00000016322
annotation not available
    
   0.828
EFCAB6
EF-hand calcium binding domain 6.
    
   0.828
ENSNVIP00000006300
annotation not available
    
   0.670
ENSNVIP00000006348
annotation not available
    
   0.670
TEPP
Testis, prostate and placenta expressed.
   
   0.664
C9orf135
Chromosome 9 open reading frame 135.
   
   0.663
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.