Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE1BPhosphodiesterase 1B. (535 aa)    
Predicted Functional Partners:
PDE1C
Phosphodiesterase 1C.
   
  0.957
GUCY2C
Guanylate cyclase 2C.
     
 0.933
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.932
CALML5
Calmodulin like 5.
    
 0.929
CALML6
Calmodulin like 6.
    
 0.928
ADCY6
Adenylate cyclase 6.
     
 0.915
ADCY5
Adenylate cyclase 5.
     
 0.915
ADCY8
Adenylate cyclase 8.
     
 0.909
APRT
Adenine phosphoribosyltransferase.
     
 0.904
PDE1A
Phosphodiesterase 1A.
   
 
  0.901
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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