Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A40Solute carrier family 25 member 40. (336 aa)    
Predicted Functional Partners:
TBC1D12
TBC1 domain family member 12.
      
 0.679
ENSNVIP00000001568
annotation not available
      
 0.560
SLC5A9
Solute carrier family 5 member 9.
      
 0.550
SRRM1
Serine and arginine repetitive matrix 1.
      
 0.545
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.538
TCF19
Transcription factor 19.
      
 0.489
RUNDC3B
RUN domain containing 3B.
      
 0.488
PUM2
Pumilio RNA binding family member 2.
    
   0.484
PUM1
Pumilio RNA binding family member 1.
    
   0.484
CNOT4
CCR4-NOT transcription complex subunit 4.
      
 0.473
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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