STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF654Zinc finger protein 654. (1130 aa)    
Predicted Functional Partners:
C3orf38
Chromosome 3 open reading frame 38.
      
 0.737
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
    0.715
ENSNVIP00000027687
Nuclear receptor interacting protein 1.
    
 
 0.611
DDX58
DExD/H-box helicase 58.
    
 0.575
ZNF618
Zinc finger protein 618.
    
 
 0.554
MAD2L1BP
MAD2L1 binding protein.
    
 
 0.543
POLD3
DNA polymerase delta 3, accessory subunit.
   
 0.504
MED13L
Mediator complex subunit 13L.
   
 
 0.475
ITGA5
Integrin subunit alpha 5.
     
  0.454
LEPROTL1
Leptin receptor overlapping transcript like 1.
     
  0.454
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.