MGRN1 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

MGRN1

Mahogunin ring finger 1. (576 aa)

Predicted Functional Partners:

ENSNVIP00000031918

0.966

ATRN

0.962

ENSNVIP00000000670

0.937

ENSNVIP00000007056

0.895

SMO

0.883

ENSNVIP00000009116

0.842

ENSNVIP00000024206

0.842

ASIP

0.754

MITF

0.753

AMFR

0.731

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMFR	MGRN1	ENSNVIP00000021241	ENSNVIP00000003775	Autocrine motility factor receptor.	Mahogunin ring finger 1.	0.731
ASIP	ATRN	ENSNVIP00000022622	ENSNVIP00000025383	Agouti signaling protein.	Attractin.	0.462
ASIP	ENSNVIP00000007056	ENSNVIP00000022622	ENSNVIP00000007056	Agouti signaling protein.	annotation not available	0.462
ASIP	ENSNVIP00000031918	ENSNVIP00000022622	ENSNVIP00000031918	Agouti signaling protein.	annotation not available	0.450
ASIP	MGRN1	ENSNVIP00000022622	ENSNVIP00000003775	Agouti signaling protein.	Mahogunin ring finger 1.	0.754
ASIP	MITF	ENSNVIP00000022622	ENSNVIP00000002339	Agouti signaling protein.	Melanocyte inducing transcription factor.	0.610
ATRN	ASIP	ENSNVIP00000025383	ENSNVIP00000022622	Attractin.	Agouti signaling protein.	0.462
ATRN	ENSNVIP00000000670	ENSNVIP00000025383	ENSNVIP00000000670	Attractin.	Ankyrin repeat domain 46.	0.739
ATRN	MGRN1	ENSNVIP00000025383	ENSNVIP00000003775	Attractin.	Mahogunin ring finger 1.	0.962
ATRN	SMO	ENSNVIP00000025383	ENSNVIP00000029893	Attractin.	Smoothened, frizzled class receptor.	0.700
ENSNVIP00000000670	ATRN	ENSNVIP00000000670	ENSNVIP00000025383	Ankyrin repeat domain 46.	Attractin.	0.739
ENSNVIP00000000670	ENSNVIP00000007056	ENSNVIP00000000670	ENSNVIP00000007056	Ankyrin repeat domain 46.	annotation not available	0.739
ENSNVIP00000000670	ENSNVIP00000031918	ENSNVIP00000000670	ENSNVIP00000031918	Ankyrin repeat domain 46.	annotation not available	0.852
ENSNVIP00000000670	MGRN1	ENSNVIP00000000670	ENSNVIP00000003775	Ankyrin repeat domain 46.	Mahogunin ring finger 1.	0.937
ENSNVIP00000007056	ASIP	ENSNVIP00000007056	ENSNVIP00000022622	annotation not available	Agouti signaling protein.	0.462
ENSNVIP00000007056	ENSNVIP00000000670	ENSNVIP00000007056	ENSNVIP00000000670	annotation not available	Ankyrin repeat domain 46.	0.739
ENSNVIP00000007056	MGRN1	ENSNVIP00000007056	ENSNVIP00000003775	annotation not available	Mahogunin ring finger 1.	0.895
ENSNVIP00000007056	SMO	ENSNVIP00000007056	ENSNVIP00000029893	annotation not available	Smoothened, frizzled class receptor.	0.700
ENSNVIP00000009116	ENSNVIP00000024206	ENSNVIP00000009116	ENSNVIP00000024206	annotation not available	annotation not available	0.543
ENSNVIP00000009116	MGRN1	ENSNVIP00000009116	ENSNVIP00000003775	annotation not available	Mahogunin ring finger 1.	0.842