STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C18orf54Chromosome 18 open reading frame 54. (511 aa)    
Predicted Functional Partners:
CCDC150
Coiled-coil domain containing 150.
      
 0.753
CCDC77
Coiled-coil domain containing 77.
      
 0.745
RIBC2
RIB43A domain with coiled-coils 2.
      
 0.743
C3orf14
Chromosome 3 open reading frame 14.
      
 0.742
ZNF367
Zinc finger protein 367.
      
 0.706
DONSON
Downstream neighbor of SON.
      
 0.694
MGME1
Mitochondrial genome maintenance exonuclease 1.
      
 0.660
C9orf40
Chromosome 9 open reading frame 40.
      
 0.552
CARNMT1
Carnosine N-methyltransferase 1.
      
 0.552
NEMP1
Nuclear envelope integral membrane protein 1.
      
 0.490
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.