STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2AXH2A.X variant histone. (143 aa)    
Predicted Functional Partners:
ENSNVIP00000023779
annotation not available
    
 0.956
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.935
ATM
ATM serine/threonine kinase.
    
 0.915
HDAC7
Histone deacetylase 7.
    
 0.904
ENSNVIP00000000905
Apoptosis inducing factor mitochondria associated 1.
    
 0.903
RNF168
Ring finger protein 168.
    
 0.902
HDAC3
Histone deacetylase 3.
    
 0.896
ENSNVIP00000031762
annotation not available
    
 0.896
HDAC10
Histone deacetylase 10.
    
 0.895
HDAC6
Histone deacetylase 6.
    
 0.895
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.