Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL19A1Collagen type XIX alpha 1 chain. (1124 aa)    
Predicted Functional Partners:
P3H1
Prolyl 3-hydroxylase 1.
    
 0.658
SERPINH1
Serpin family H member 1.
   
 0.574
HSPA13
Heat shock protein family A (Hsp70) member 13.
    
 0.571
PRDM15
PR/SET domain 15.
    
 0.566
NUTM1
NUT midline carcinoma family member 1.
    
 0.560
P4HB
Prolyl 4-hydroxylase subunit beta.
    
 0.556
CRTAP
Cartilage associated protein.
    
 0.540
P3H4
Prolyl 3-hydroxylase family member 4 (inactive).
    
 0.540
CNIH1
Cornichon family AMPA receptor auxiliary protein 1.
   
 
 0.535
ENSNVIP00000022390
Intraflagellar transport 81.
      
 0.534
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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