Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000003840Bardet-Biedl syndrome 10. (721 aa)    
Predicted Functional Partners:
CCT3
Chaperonin containing TCP1 subunit 3.
   
 0.994
CCT4
Chaperonin containing TCP1 subunit 4.
   
 0.993
CCT5
Chaperonin containing TCP1 subunit 5.
   
0.993
CCT8L2
Chaperonin containing TCP1 subunit 8 like 2.
   
0.984
CCT8
Chaperonin containing TCP1 subunit 8.
   
 0.984
BBS12
Bardet-Biedl syndrome 12.
    
 0.983
CCT2
Chaperonin containing TCP1 subunit 2.
   
 0.981
ENSNVIP00000020993
annotation not available
   
 0.981
MKKS
McKusick-Kaufman syndrome.
    
 0.978
CCT6A
Chaperonin containing TCP1 subunit 6A.
   
 0.974
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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