Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFTPDSurfactant protein D. (375 aa)    
Predicted Functional Partners:
SFTPB
Surfactant protein B.
   
 
 0.968
SFTPC
Pulmonary surfactant-associated protein C.
   
 
 0.968
ENSNVIP00000003807
annotation not available
   
 0.941
MASP2
Mannan binding lectin serine peptidase 2.
   
 0.917
ENSNVIP00000026403
Mannan binding lectin serine peptidase 1.
   
 0.911
SERPING1
Serpin family G member 1.
     
 0.861
AGER
Advanced glycosylation end-product specific receptor.
   
 
 0.848
C1S
Complement C1s.
   
 0.843
ENSNVIP00000027438
annotation not available
   
  
 0.833
ENSNVIP00000017323
annotation not available
   
 0.798
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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