STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNN1Calponin 1. (297 aa)    
Predicted Functional Partners:
TAGLN
Transgelin.
   
 
 0.866
MYH11
Myosin heavy chain 11.
   
 
 0.829
LMOD1
Leiomodin 1.
   
 
 0.797
DST
Dystonin.
      
 0.754
ASPM
Abnormal spindle microtubule assembly.
      
 0.754
WDR90
WD repeat domain 90.
    
 
 0.677
PRELP
Proline and arginine rich end leucine rich repeat protein.
   
 
 0.671
ENSNVIP00000007945
Calbindin 2.
   
 0.670
NME8
NME/NM23 family member 8.
    
 
 0.642
SMTN
Smoothelin.
   
  
 0.640
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.