ENSNVIP00000003936 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSNVIP00000003936

annotation not available (100 aa)

Predicted Functional Partners:

RPS9

0.816

ENSNVIP00000005139

0.815

RPL23

0.812

ENSNVIP00000007388

0.812

RPL14

0.810

RPL13A

0.807

RPLP2

0.805

ENSNVIP00000019681

0.797

RPS28

0.793

RPS11

0.768

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000003936	ENSNVIP00000005139	ENSNVIP00000003936	ENSNVIP00000005139	annotation not available	annotation not available	0.815
ENSNVIP00000003936	ENSNVIP00000007388	ENSNVIP00000003936	ENSNVIP00000007388	annotation not available	annotation not available	0.812
ENSNVIP00000003936	ENSNVIP00000019681	ENSNVIP00000003936	ENSNVIP00000019681	annotation not available	annotation not available	0.797
ENSNVIP00000003936	RPL13A	ENSNVIP00000003936	ENSNVIP00000017450	annotation not available	Ribosomal protein L13a.	0.807
ENSNVIP00000003936	RPL14	ENSNVIP00000003936	ENSNVIP00000031743	annotation not available	Ribosomal protein L14.	0.810
ENSNVIP00000003936	RPL23	ENSNVIP00000003936	ENSNVIP00000005949	annotation not available	Ribosomal protein L23.	0.812
ENSNVIP00000003936	RPLP2	ENSNVIP00000003936	ENSNVIP00000007838	annotation not available	Ribosomal protein lateral stalk subunit P2.	0.805
ENSNVIP00000003936	RPS11	ENSNVIP00000003936	ENSNVIP00000017517	annotation not available	Ribosomal protein S11.	0.768
ENSNVIP00000003936	RPS28	ENSNVIP00000003936	ENSNVIP00000022162	annotation not available	Ribosomal protein S28.	0.793
ENSNVIP00000003936	RPS9	ENSNVIP00000003936	ENSNVIP00000005173	annotation not available	Ribosomal protein S9.	0.816
ENSNVIP00000005139	ENSNVIP00000003936	ENSNVIP00000005139	ENSNVIP00000003936	annotation not available	annotation not available	0.815
ENSNVIP00000005139	ENSNVIP00000007388	ENSNVIP00000005139	ENSNVIP00000007388	annotation not available	annotation not available	0.995
ENSNVIP00000005139	ENSNVIP00000019681	ENSNVIP00000005139	ENSNVIP00000019681	annotation not available	annotation not available	0.999
ENSNVIP00000005139	RPL13A	ENSNVIP00000005139	ENSNVIP00000017450	annotation not available	Ribosomal protein L13a.	0.999
ENSNVIP00000005139	RPL14	ENSNVIP00000005139	ENSNVIP00000031743	annotation not available	Ribosomal protein L14.	0.999
ENSNVIP00000005139	RPL23	ENSNVIP00000005139	ENSNVIP00000005949	annotation not available	Ribosomal protein L23.	0.995
ENSNVIP00000005139	RPLP2	ENSNVIP00000005139	ENSNVIP00000007838	annotation not available	Ribosomal protein lateral stalk subunit P2.	0.999
ENSNVIP00000005139	RPS11	ENSNVIP00000005139	ENSNVIP00000017517	annotation not available	Ribosomal protein S11.	0.999
ENSNVIP00000005139	RPS28	ENSNVIP00000005139	ENSNVIP00000022162	annotation not available	Ribosomal protein S28.	0.999
ENSNVIP00000005139	RPS9	ENSNVIP00000005139	ENSNVIP00000005173	annotation not available	Ribosomal protein S9.	0.999