Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL39Mitochondrial ribosomal protein L39. (315 aa)    
Predicted Functional Partners:
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.977
MRPL1
Mitochondrial ribosomal protein L1.
   
 
 0.974
MRPL44
Mitochondrial ribosomal protein L44.
  
 
 0.971
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 0.968
ENSNVIP00000018494
Mitochondrial ribosomal protein L32.
  
 
 0.966
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.965
ENSNVIP00000018390
Mitochondrial ribosomal protein L11.
   
 
 0.963
MRPL16
Mitochondrial ribosomal protein L16.
   
 
 0.961
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.960
ENSNVIP00000022381
Mitochondrial ribosomal protein L49.
   
 
 0.959
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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