Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSNVIP00000003985Zinc finger CCHC-type containing 24. (241 aa)    
Predicted Functional Partners:
TMEM109
Transmembrane protein 109.
      
 0.644
TMEM54
Transmembrane protein 54.
      
 0.612
FAM126A
Family with sequence similarity 126 member A.
      
 0.577
DENND5A
DENN domain containing 5A.
      
 0.575
COQ9
Coenzyme Q9.
      
 0.548
KLK10
Kallikrein related peptidase 10.
      
 0.540
ENSNVIP00000026117
Beta-carotene oxygenase 1.
      
 0.535
RBM47
RNA binding motif protein 47.
    
 
 0.507
FKBP14
FKBP prolyl isomerase 14.
      
 0.493
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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