Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRIF1Ligand dependent nuclear receptor interacting factor 1. (762 aa)    
Predicted Functional Partners:
CBX5
Chromobox 5.
    
 
 0.865
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
    
 
 0.774
CBX1
Chromobox 1.
    
 
 0.731
ENSNVIP00000005580
annotation not available
    
 
 0.699
ENSNVIP00000011634
annotation not available
    
 
 0.699
CBX3
Chromobox 3.
    
 
 0.699
ENSNVIP00000027448
annotation not available
    
 
 0.699
PRR14
Proline rich 14.
    
 
 0.674
STAG1
Stromal antigen 1.
      
 0.657
CNOT10
CCR4-NOT transcription complex subunit 10.
      
 0.581
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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