Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000004005Ring finger and WD repeat domain 3. (774 aa)    
Predicted Functional Partners:
ENSNVIP00000025797
Replication protein A3.
    
 
 0.965
ENSNVIP00000014150
Replication protein A1.
   
 
 0.954
PRIMPOL
Primase and DNA directed polymerase.
    
 
 0.940
ENSNVIP00000006517
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
    
 
 0.880
WRN
WRN RecQ like helicase.
   
 
 0.851
TIMELESS
Timeless circadian regulator.
   
 
 0.759
B2M
Beta-2-microglobulin.
    
 
 0.695
RPA2
Replication protein A2.
    
 
 0.695
ENSNVIP00000028628
Meiosis specific with OB-fold.
   
 
 0.671
WDR59
WD repeat domain 59.
      
 0.641
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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