STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD53CD53 molecule. (215 aa)    
Predicted Functional Partners:
ENSNVIP00000031301
Lysosomal protein transmembrane 5.
   
  
 0.917
CD48
CD48 molecule.
   
 
 0.850
ENSNVIP00000030706
annotation not available
   
  
 0.815
LCP1
Lymphocyte cytosolic protein 1.
   
    0.803
ENSNVIP00000016523
annotation not available
   
 0.801
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.801
ITGB2
Integrin subunit beta 2.
   
 0.782
LCP2
Lymphocyte cytosolic protein 2.
   
  
 0.782
EVI2B
Ecotropic viral integration site 2B.
   
  
 0.710
CD63
CD63 molecule.
  
 
0.706
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.