STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC3Armadillo repeat containing 3. (873 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.908
EFCAB1
EF-hand calcium binding domain 1.
   
 
 0.876
IQUB
IQ motif and ubiquitin domain containing.
   
 
 0.874
ENSNVIP00000007399
Chromosome 4 open reading frame 47.
    
 
 0.873
IQCD
IQ motif containing D.
   
 
 0.840
NME8
NME/NM23 family member 8.
   
 
 0.836
ENSNVIP00000009304
annotation not available
   
 
 0.835
ENSNVIP00000007962
annotation not available
   
 
 0.818
ENSNVIP00000007424
Cilia and flagella associated protein 52.
   
 
 0.809
FAM183A
Family with sequence similarity 183 member A.
   
 
 0.796
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.