STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN3PDZ domain containing ring finger 3. (1067 aa)    
Predicted Functional Partners:
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.818
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.769
RANGRF
RAN guanine nucleotide release factor.
      
 0.750
LONP2
Lon peptidase 2, peroxisomal.
      
 0.750
ENSNVIP00000025701
U-box domain containing 5.
      
 0.750
ENSNVIP00000028003
FCH and double SH3 domains 2.
      
 0.749
ENSNVIP00000014982
annotation not available
      
 0.715
ENSNVIP00000003885
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.708
SH2D4B
SH2 domain containing 4B.
      
 0.656
TAF3
TATA-box binding protein associated factor 3.
   
    0.651
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.