Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDZRN3PDZ domain containing ring finger 3. (1067 aa)    
Predicted Functional Partners:
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.781
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.663
TAF3
TATA-box binding protein associated factor 3.
   
    0.651
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.639
ENSNVIP00000028003
FCH and double SH3 domains 2.
      
 0.638
RANGRF
RAN guanine nucleotide release factor.
      
 0.611
ENSNVIP00000003885
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.610
ENSNVIP00000025701
U-box domain containing 5.
      
 0.608
OIP5
Opa interacting protein 5.
    
   0.571
LONP2
Lon peptidase 2, peroxisomal.
      
 0.559
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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