STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM102Transmembrane protein 102. (509 aa)    
Predicted Functional Partners:
ENSNVIP00000027651
RAB3A interacting protein like 1.
    
   0.874
GDF5
Growth differentiation factor 5.
    
 
 0.747
ENSNVIP00000013840
annotation not available
    
   0.729
GDF6
Growth differentiation factor 6.
    
 
 0.579
THRSP
Thyroid hormone responsive.
    
  0.500
SPEM2
SPEM family member 2.
  
     0.465
FAM222A
Family with sequence similarity 222 member A.
  
 
   0.446
IL9
Interleukin 9.
  
     0.425
ITPRIPL1
ITPRIP like 1.
      
 0.415
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
     
  0.401
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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