STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSX1Visual system homeobox 1. (364 aa)    
Predicted Functional Partners:
ATOH7
Atonal bHLH transcription factor 7.
      
 0.663
COL8A2
Collagen type VIII alpha 2 chain.
      
 0.607
NXNL1
Nucleoredoxin like 1.
   
  
 0.590
SCGN
Secretagogin, EF-hand calcium binding protein.
      
 0.562
POU4F2
POU class 4 homeobox 2.
   
  
 0.554
ENSNVIP00000006301
annotation not available
   
  
 0.548
ENSNVIP00000017525
annotation not available
    
   0.545
ENSNVIP00000028363
annotation not available
    
   0.545
GNB3
G protein subunit beta 3.
   
  
 0.542
ZNF469
Zinc finger protein 469.
      
 0.538
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.