ENSNVIP00000004088 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNVIP00000004088

annotation not available (130 aa)

Predicted Functional Partners:

MYSM1

0.834

H2BC3

0.826

ENSNVIP00000001477

0.800

ENSNVIP00000001484

0.799

H2BC18

0.738

ENSNVIP00000004069

0.682

H2BC1

0.675

H2AW

0.673

ENSNVIP00000008549

0.673

ENSNVIP00000009518

0.654

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000001477	ENSNVIP00000004069	ENSNVIP00000001477	ENSNVIP00000004069	annotation not available	annotation not available	0.800
ENSNVIP00000001477	ENSNVIP00000004088	ENSNVIP00000001477	ENSNVIP00000004088	annotation not available	annotation not available	0.800
ENSNVIP00000001477	ENSNVIP00000008549	ENSNVIP00000001477	ENSNVIP00000008549	annotation not available	annotation not available	0.568
ENSNVIP00000001477	ENSNVIP00000009518	ENSNVIP00000001477	ENSNVIP00000009518	annotation not available	annotation not available	0.565
ENSNVIP00000001477	H2AW	ENSNVIP00000001477	ENSNVIP00000001473	annotation not available	H2A.W histone.	0.919
ENSNVIP00000001477	H2BC1	ENSNVIP00000001477	ENSNVIP00000008552	annotation not available	H2B clustered histone 1.	0.568
ENSNVIP00000001477	H2BC18	ENSNVIP00000001477	ENSNVIP00000004217	annotation not available	H2B clustered histone 18.	0.689
ENSNVIP00000001477	H2BC3	ENSNVIP00000001477	ENSNVIP00000007954	annotation not available	H2B clustered histone 3.	0.828
ENSNVIP00000001484	ENSNVIP00000004069	ENSNVIP00000001484	ENSNVIP00000004069	annotation not available	annotation not available	0.800
ENSNVIP00000001484	ENSNVIP00000004088	ENSNVIP00000001484	ENSNVIP00000004088	annotation not available	annotation not available	0.799
ENSNVIP00000001484	ENSNVIP00000008549	ENSNVIP00000001484	ENSNVIP00000008549	annotation not available	annotation not available	0.568
ENSNVIP00000001484	ENSNVIP00000009518	ENSNVIP00000001484	ENSNVIP00000009518	annotation not available	annotation not available	0.565
ENSNVIP00000001484	H2AW	ENSNVIP00000001484	ENSNVIP00000001473	annotation not available	H2A.W histone.	0.919
ENSNVIP00000001484	H2BC1	ENSNVIP00000001484	ENSNVIP00000008552	annotation not available	H2B clustered histone 1.	0.568
ENSNVIP00000001484	H2BC18	ENSNVIP00000001484	ENSNVIP00000004217	annotation not available	H2B clustered histone 18.	0.689
ENSNVIP00000001484	H2BC3	ENSNVIP00000001484	ENSNVIP00000007954	annotation not available	H2B clustered histone 3.	0.828
ENSNVIP00000004069	ENSNVIP00000001477	ENSNVIP00000004069	ENSNVIP00000001477	annotation not available	annotation not available	0.800
ENSNVIP00000004069	ENSNVIP00000001484	ENSNVIP00000004069	ENSNVIP00000001484	annotation not available	annotation not available	0.800
ENSNVIP00000004069	ENSNVIP00000004088	ENSNVIP00000004069	ENSNVIP00000004088	annotation not available	annotation not available	0.682
ENSNVIP00000004069	ENSNVIP00000008549	ENSNVIP00000004069	ENSNVIP00000008549	annotation not available	annotation not available	0.629