STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGFATransforming growth factor alpha. (159 aa)    
Predicted Functional Partners:
EGFR
Epidermal growth factor receptor.
    
 0.997
ERBB4
Erb-b2 receptor tyrosine kinase 4.
    
 0.970
ERBB2
Erb-b2 receptor tyrosine kinase 2.
    
 0.969
ERBB3
Erb-b2 receptor tyrosine kinase 3.
    
 0.962
EGF
Epidermal growth factor.
     
 0.945
ENSNVIP00000013151
Insulin like growth factor 1.
     
 0.928
FLT1
Fms related tyrosine kinase 1.
     
 0.902
ENSNVIP00000001736
Platelet derived growth factor subunit B.
     
 0.900
PDGFRA
Platelet derived growth factor receptor alpha.
     
 0.891
NTRK1
Neurotrophic receptor tyrosine kinase 1.
   
 
 0.889
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.