STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83WD repeat domain 83. (315 aa)    
Predicted Functional Partners:
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.959
PRPF8
pre-mRNA processing factor 8.
    
   0.945
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
   
 0.940
GPATCH1
G-patch domain containing 1.
    
 
 0.906
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
   
  
 0.745
WDR83OS
WD repeat domain 83 opposite strand.
   
  
 0.744
RBM39
RNA binding motif protein 39.
      
 0.715
RBM6
RNA binding motif protein 6.
      
 0.656
ERI2
ERI1 exoribonuclease family member 2.
   
  
 0.623
RASSF3
Ras association domain family member 3.
      
 0.622
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.