STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83WD repeat domain 83. (315 aa)    
Predicted Functional Partners:
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.952
PRPF8
pre-mRNA processing factor 8.
    
 
 0.944
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
   
 0.941
DHX35
DEAH-box helicase 35.
   
 
 0.939
AQR
Aquarius intron-binding spliceosomal factor.
    
 
 0.937
GPATCH1
G-patch domain containing 1.
    
 
 0.931
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
     
  0.923
CWF19L2
CWF19 like cell cycle control factor 2.
   
 
 0.902
ENSNVIP00000008597
annotation not available
    
 
 0.886
BUD31
BUD31 homolog.
    
 
 0.886
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.