Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL13BADP ribosylation factor like GTPase 13B. (430 aa)    
Predicted Functional Partners:
IFT22
Intraflagellar transport 22.
    
 
 0.970
PDE6D
Phosphodiesterase 6D.
     
 0.967
INPP5E
Inositol polyphosphate-5-phosphatase E.
     
 0.967
ENSNVIP00000022390
Intraflagellar transport 81.
    
 
 0.965
IFT74
Intraflagellar transport 74.
    
 0.957
IFT46
Intraflagellar transport 46.
    
 
 0.949
IFT52
Intraflagellar transport 52.
    
 
 0.929
ENSNVIP00000004242
Intraflagellar transport 27.
    
 
 0.904
IFT88
Intraflagellar transport 88.
    
 0.873
ENSNVIP00000010236
annotation not available
   
 0.834
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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