STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK3BUroplakin 3B. (281 aa)    
Predicted Functional Partners:
ENSNVIP00000014418
Uroplakin-1b.
   
  
 0.783
LRRN4
Leucine rich repeat neuronal 4.
   
  
 0.674
UPK1A
Uroplakin 1A.
   
  
 0.672
UPK2
Uroplakin 2.
      
 0.663
DTYMK
Deoxythymidylate kinase.
      
 0.536
ENSNVIP00000021821
GTP cyclohydrolase I feedback regulator.
      
 0.535
TCF21
Transcription factor 21.
   
  
 0.534
ENSNVIP00000008136
MNAT1 component of CDK activating kinase.
      
 0.500
LMBRD2
LMBR1 domain containing 2.
      
 0.488
VAT1L
Vesicle amine transport 1 like.
      
 0.484
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.