Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP1Nipsnap homolog 1. (350 aa)    
Predicted Functional Partners:
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
   
    0.847
ENSNVIP00000014721
Small integral membrane protein 12.
   
    0.834
SNU13
Small nuclear ribonucleoprotein 13.
   
  
 0.767
SQSTM1
Sequestosome 1.
    
 
 0.748
PSMD1
Proteasome 26S subunit, non-ATPase 1.
   
    0.729
UTP15
UTP15 small subunit processome component.
   
    0.729
WDR6
WD repeat domain 6.
   
    0.729
NOP56
NOP56 ribonucleoprotein.
   
    0.726
NPAS4
Neuronal PAS domain protein 4.
   
    0.725
FUNDC1
FUN14 domain containing 1.
      
 0.721
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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