STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN7Calpain 7. (813 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
   
 0.845
CAST
Calpastatin.
   
 0.774
TFAP2A
Transcription factor AP-2 alpha.
      
 0.613
ITSN2
Intersectin 2.
   
 
  0.587
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.570
COLQ
Collagen like tail subunit of asymmetric acetylcholinesterase.
      
 0.567
KLK10
Kallikrein related peptidase 10.
    
 
 0.565
MITD1
Microtubule interacting and trafficking domain containing 1.
   
  
 0.562
KLK11
Kallikrein related peptidase 11.
    
 
 0.545
UBQLN2
Ubiquilin 2.
   
  
 0.541
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.