ENSNVIP00000004176 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNVIP00000004176

annotation not available (126 aa)

Predicted Functional Partners:

H2AX

0.776

H2AW

0.773

H2AC1

0.762

ENSNVIP00000007939

0.691

MACROH2A1

0.681

MACROH2A2

0.672

ENSNVIP00000007633

0.648

H2AC20

0.647

H2AC21

0.646

ENSNVIP00000004088

0.646

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000004088	ENSNVIP00000004176	ENSNVIP00000004088	ENSNVIP00000004176	annotation not available	annotation not available	0.646
ENSNVIP00000004088	ENSNVIP00000007939	ENSNVIP00000004088	ENSNVIP00000007939	annotation not available	annotation not available	0.435
ENSNVIP00000004088	H2AC1	ENSNVIP00000004088	ENSNVIP00000008559	annotation not available	H2A clustered histone 1.	0.648
ENSNVIP00000004088	H2AW	ENSNVIP00000004088	ENSNVIP00000001473	annotation not available	H2A.W histone.	0.673
ENSNVIP00000004088	H2AX	ENSNVIP00000004088	ENSNVIP00000003828	annotation not available	H2A.X variant histone.	0.638
ENSNVIP00000004176	ENSNVIP00000004088	ENSNVIP00000004176	ENSNVIP00000004088	annotation not available	annotation not available	0.646
ENSNVIP00000004176	ENSNVIP00000007633	ENSNVIP00000004176	ENSNVIP00000007633	annotation not available	annotation not available	0.648
ENSNVIP00000004176	ENSNVIP00000007939	ENSNVIP00000004176	ENSNVIP00000007939	annotation not available	annotation not available	0.691
ENSNVIP00000004176	H2AC1	ENSNVIP00000004176	ENSNVIP00000008559	annotation not available	H2A clustered histone 1.	0.762
ENSNVIP00000004176	H2AC20	ENSNVIP00000004176	ENSNVIP00000004026	annotation not available	H2A clustered histone 20.	0.647
ENSNVIP00000004176	H2AC21	ENSNVIP00000004176	ENSNVIP00000004021	annotation not available	H2A clustered histone 21.	0.646
ENSNVIP00000004176	H2AW	ENSNVIP00000004176	ENSNVIP00000001473	annotation not available	H2A.W histone.	0.773
ENSNVIP00000004176	H2AX	ENSNVIP00000004176	ENSNVIP00000003828	annotation not available	H2A.X variant histone.	0.776
ENSNVIP00000004176	MACROH2A1	ENSNVIP00000004176	ENSNVIP00000020624	annotation not available	macroH2A.1 histone.	0.681
ENSNVIP00000004176	MACROH2A2	ENSNVIP00000004176	ENSNVIP00000014078	annotation not available	macroH2A.2 histone.	0.672
ENSNVIP00000007633	ENSNVIP00000004176	ENSNVIP00000007633	ENSNVIP00000004176	annotation not available	annotation not available	0.648
ENSNVIP00000007633	H2AX	ENSNVIP00000007633	ENSNVIP00000003828	annotation not available	H2A.X variant histone.	0.638
ENSNVIP00000007939	ENSNVIP00000004088	ENSNVIP00000007939	ENSNVIP00000004088	annotation not available	annotation not available	0.435
ENSNVIP00000007939	ENSNVIP00000004176	ENSNVIP00000007939	ENSNVIP00000004176	annotation not available	annotation not available	0.691
ENSNVIP00000007939	H2AC1	ENSNVIP00000007939	ENSNVIP00000008559	annotation not available	H2A clustered histone 1.	0.829