STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000004233Parvalbumin. (110 aa)    
Predicted Functional Partners:
ATP2A1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1.
   
 0.780
ENSNVIP00000016323
Neuropeptide Y.
      
 0.761
DCX
Doublecortin.
     
 0.756
ENSNVIP00000007945
Calbindin 2.
      
 0.753
ENSNVIP00000008962
Calbindin 1.
      
 0.753
ENSNVIP00000026437
Somatostatin.
      
 0.753
TBR1
T-box brain transcription factor 1.
      
 0.718
ENSNVIP00000024625
Cholecystokinin.
   
  
 0.711
SDF4
Stromal cell derived factor 4.
      
 0.703
NOS1
Nitric oxide synthase 1.
    
 0.700
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.