Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD2AGRAM domain containing 2A. (313 aa)    
Predicted Functional Partners:
GRAMD2B
GRAM domain containing 2B.
    
 
 0.640
ALDH8A1
Aldehyde dehydrogenase 8 family member A1.
      
 0.488
DCST1
DC-STAMP domain containing 1.
      
 0.488
GRAMD1B
GRAM domain containing 1B.
    
 
 0.465
ARCN1
Archain 1.
    
   0.447
ENSNVIP00000006380
Sodium voltage-gated channel beta subunit 4.
   
 0.429
COPA
Coatomer protein complex subunit alpha.
   
   0.423
ERICH2
Glutamate rich 2.
      
 0.416
TECRL
trans-2,3-enoyl-CoA reductase like.
      
 0.416
ACOT12
acyl-CoA thioesterase 12.
      
 0.406
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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