SH3BP5 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SH3BP5

SH3 domain binding protein 5. (454 aa)

Predicted Functional Partners:

BTK

0.795

RAB11A

0.775

RAB11B

0.775

ENSNVIP00000008929

0.707

TNKS

0.695

USP10

0.685

ENSNVIP00000004163

0.681

ATP2B4

0.607

PRCP

0.592

BMX

0.574

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP2B4	ENSNVIP00000004163	ENSNVIP00000020820	ENSNVIP00000004163	ATPase plasma membrane Ca2+ transporting 4.	annotation not available	0.414
ATP2B4	SH3BP5	ENSNVIP00000020820	ENSNVIP00000004292	ATPase plasma membrane Ca2+ transporting 4.	SH3 domain binding protein 5.	0.607
BMX	SH3BP5	ENSNVIP00000026378	ENSNVIP00000004292	BMX non-receptor tyrosine kinase.	SH3 domain binding protein 5.	0.574
BTK	SH3BP5	ENSNVIP00000018474	ENSNVIP00000004292	Bruton tyrosine kinase.	SH3 domain binding protein 5.	0.795
ENSNVIP00000004163	ATP2B4	ENSNVIP00000004163	ENSNVIP00000020820	annotation not available	ATPase plasma membrane Ca2+ transporting 4.	0.414
ENSNVIP00000004163	PRCP	ENSNVIP00000004163	ENSNVIP00000001612	annotation not available	Prolylcarboxypeptidase.	0.493
ENSNVIP00000004163	SH3BP5	ENSNVIP00000004163	ENSNVIP00000004292	annotation not available	SH3 domain binding protein 5.	0.681
ENSNVIP00000008929	RAB11A	ENSNVIP00000008929	ENSNVIP00000021498	annotation not available	RAB11A, member RAS oncogene family.	0.733
ENSNVIP00000008929	RAB11B	ENSNVIP00000008929	ENSNVIP00000022068	annotation not available	RAB11B, member RAS oncogene family.	0.733
ENSNVIP00000008929	SH3BP5	ENSNVIP00000008929	ENSNVIP00000004292	annotation not available	SH3 domain binding protein 5.	0.707
PRCP	ENSNVIP00000004163	ENSNVIP00000001612	ENSNVIP00000004163	Prolylcarboxypeptidase.	annotation not available	0.493
PRCP	SH3BP5	ENSNVIP00000001612	ENSNVIP00000004292	Prolylcarboxypeptidase.	SH3 domain binding protein 5.	0.592
RAB11A	ENSNVIP00000008929	ENSNVIP00000021498	ENSNVIP00000008929	RAB11A, member RAS oncogene family.	annotation not available	0.733
RAB11A	SH3BP5	ENSNVIP00000021498	ENSNVIP00000004292	RAB11A, member RAS oncogene family.	SH3 domain binding protein 5.	0.775
RAB11B	ENSNVIP00000008929	ENSNVIP00000022068	ENSNVIP00000008929	RAB11B, member RAS oncogene family.	annotation not available	0.733
RAB11B	SH3BP5	ENSNVIP00000022068	ENSNVIP00000004292	RAB11B, member RAS oncogene family.	SH3 domain binding protein 5.	0.775
SH3BP5	ATP2B4	ENSNVIP00000004292	ENSNVIP00000020820	SH3 domain binding protein 5.	ATPase plasma membrane Ca2+ transporting 4.	0.607
SH3BP5	BMX	ENSNVIP00000004292	ENSNVIP00000026378	SH3 domain binding protein 5.	BMX non-receptor tyrosine kinase.	0.574
SH3BP5	BTK	ENSNVIP00000004292	ENSNVIP00000018474	SH3 domain binding protein 5.	Bruton tyrosine kinase.	0.795
SH3BP5	ENSNVIP00000004163	ENSNVIP00000004292	ENSNVIP00000004163	SH3 domain binding protein 5.	annotation not available	0.681