Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BPTFBromodomain PHD finger transcription factor. (2900 aa)    
Predicted Functional Partners:
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 0.935
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.935
HMGXB4
HMG-box containing 4.
    
  0.915
RSF1
Remodeling and spacing factor 1.
   
 
 0.906
NIPBL
NIPBL cohesin loading factor.
   
    0.876
TFAP4
Transcription factor AP-4.
    
 
 0.876
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.875
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.855
PRRC2C
Proline rich coiled-coil 2C.
   
  
 0.839
ENSNVIP00000017455
PHD finger protein 3.
   
    0.834
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.